Motif IL_50828.1 Version IL_50828.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 5 | 6 | 1-6 | 2-3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2ZJR_058 | 2ZJR | 0.0000 | 2 | X | LSU rRNA | C | 1497 | G | 1498 | * | C | 1522 | A | 1523 | U | 1526 | G | 1527 | cWW | cWW |
| 2 | IL_3PYO_050 | 3PYO | 0.7921 | 1 | A | 23S ribosomal RNA | U | 1415 | G | 1416 | * | C | 1582 | A | 1583 | A | 1586 | A | 1587 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CG*CACAUG | 1 |
| UG*CACAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *ACAU | 1 |
| *ACA | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_50828.1 | Only in the parent motif |
|---|---|---|---|
| IL_06499.1 Compare | IL_2ZJR_058 | IL_3PYO_050 |
Children motifs
| Child motif | Common motif instances | Only in IL_50828.1 | Only in the child motif |
|---|---|---|---|
| IL_81441.1 Compare | IL_2ZJR_058 | IL_3PYO_050 | IL_2QBG_059 |
Coloring options: