Motif IL_51702.1 Version IL_51702.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-12 | 3-11 | 4-10 | 5-9 | 6-9 | 7-8 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8P9A_300 | 8P9A | 0.0000 | 0 | AR | LSU rRNA | U | 1737 | C | 1738 | U | 1739 | U | 1740 | A | 1741 | U | 1742 | G | 1743 | * | U | 1702 | U | 1703 | A | 1704 | U | 1705 | C | 1706 | A | 1707 | cWW | ncWB | tWH | cWw | cWW | |||
| 2 | IL_4LFB_009 | 4LFB | 0.9539 | 0 | tWH-tWH-tHW-tHW | A | SSU rRNA | G | 168 | C | 169 | U | 170 | A | 171 | A | 172 | U | 173 | C | 174 | * | G | 148 | A | 149 | C | 150 | A | 151 | A | 152 | C | 153 | cWW | tWH | tWH | tHW | tHW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUUAUG*UUAUCA | 1 |
| GCUAAUC*GACAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUAU*UAUC | 1 |
| CUAAU*ACAA | 1 |
- Annotations
-
- tWH-tWH-tHW-tHW (1)
- (1)
- Basepair signature
- cWW-L-R-tWH-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.95 | Avg 0.48 | Max 0.95
Coloring options: