Motif IL_52451.3 Version IL_52451.3 of this group appears in releases 3.8 to 3.14
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 3-7 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1DUQ_001 | 1DUQ | 0.0450 | 1 | A+B | THE REV BINDING ELEMENT | G | 104 | G | 105 | G | 106 | C | 107 | * | G | 123 | G | 124 | A | 126 | C | 127 | cWW | cWW | cWH | cWW | |
| 2 | IL_1CSL_001 | 1CSL | 0.0000 | 1 | A+B | RNA (13-mer) + RNA (15-mer) | G | 46 | G | 47 | G | 48 | C | 49 | * | G | 70 | G | 71 | A | 73 | C | 74 | cWW | cWW | cWH | cWW | |
| 3 | IL_4KR6_002 | 4KR6 | 0.9465 | 7 | D | RNA (39-MER) | C | 25 | A | 26 | A | 27 | G | 28 | * | U | 8 | A | 9 | U | 16 | G | 18 | cWW | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGGC*GGUAC | 2 |
| CAAG*UAGUGUCCUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GG*GUA | 2 |
| AA*AGUGUCCUU | 1 |
Release history
| Release | 3.8 | 3.9 | 3.10 | 3.11 | 3.12 | 3.13 | 3.14 |
|---|---|---|---|---|---|---|---|
| Date | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cHW-cWW-cWW
- Heat map statistics
- Min 0.05 | Avg 0.43 | Max 0.95
Coloring options: