Motif IL_52708.1 Version IL_52708.1 of this group appears in releases 3.77 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 2-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8SP9_001 | 8SP9 | 0.1909 | 1 | Multiple bulged bases | C | tRNA scaffold,CVB3 Cloverleaf RNA | C | 76 | A | 78 | G | 79 | * | C | 106 | G | 107 | cWW | cWW | |
| 2 | IL_8S95_001 | 8S95 | 0.0000 | 1 | C | Lysine tRNA scaffold,Poliovirus cloverleaf RNA | C | 78 | A | 80 | G | 81 | * | C | 108 | G | 109 | cWW | ntSs | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAG*CG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UA* | 2 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Multiple bulged bases (1)
- Basepair signature
- cWW-tSS-cWW
- Heat map statistics
- Min 0.19 | Avg 0.10 | Max 0.19
Coloring options: