Motif IL_53509.1 Version IL_53509.1 of this group appears in releases 4.1 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 1-12 | 8-10 | 8-11 | 9-10 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_7JRT_003 | 7JRT | 0.0000 | 1 | A | RNA nano bracelet | U | 77 | G | 79 | C | 80 | G | 81 | A | 82 | G | 83 | C | 84 | A | 85 | C | 86 | * | G | 123 | G | 124 | A | 125 | cWW | cWW | cWW | |
| 2 | IL_7JRT_010 | 7JRT | 0.5759 | 1 | B | RNA nano bracelet | U | 77 | G | 79 | C | 80 | G | 81 | A | 82 | G | 83 | C | 84 | A | 85 | C | 86 | * | G | 123 | G | 124 | A | 125 | cWW | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCGCGAGCAC*GGA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGCGAGCA*G | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R
- Heat map statistics
- Min 0.58 | Avg 0.29 | Max 0.58
Coloring options: