Motif IL_54405.1 Version IL_54405.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 1-16 | 2-15 | 3-14 | 4-5 | 5-13 | 6-12 | 9-10 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4W23_052 | 4W23 | 0 | 0 | 2 | 18S ribosomal RNA | G | 1168 | G | 1169 | A | 1170 | G | 1171 | U | 1172 | A | 1173 | U | 1174 | G | 1175 | G | 1176 | * | C | 1185 | U | 1186 | G | 1187 | A | 1188 | A | 1189 | A | 1190 | C | 1191 | cWW | ntSH | tHH | cSH | tWH | tHS | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAGUAUGG*CUGAAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAGUAUG*UGAAA | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-L-R-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: