Motif IL_55583.1 Version IL_55583.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 2-3 | 2-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4CUV_111 | 4CUV | 0.0000 | 1 | 1 | G | 2770 | U | 2771 | C | 2773 | * | G | 2787 | C | 2788 | ncWW | ncWW | cWW | ||
| 2 | IL_4KQY_004 | 4KQY | 0.9162 | 1 | Minor groove platform | A | C | 73 | A | 74 | G | 76 | * | C | 49 | G | 50 | cWW | ncSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCC*GC | 1 |
| CAAG*CG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UC* | 1 |
| AA* | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | New id, 2 parents |
Parent motifs
| Parent motif | Common motif instances | Only in IL_55583.1 | Only in the parent motif |
|---|---|---|---|
| IL_94430.8 Compare | IL_4CUV_111 | IL_4KQY_004 | IL_4QCN_054, IL_4TS2_002, IL_4CUV_152, IL_4QCN_067, IL_4IOA_066, IL_4IOA_106, IL_3Q1Q_003, IL_2QBG_072, IL_4A1B_086, IL_2XXA_013, IL_1S72_066, IL_2AW7_007, IL_4BPP_040, IL_3U5H_145 |
| IL_64894.1 Compare | IL_4KQY_004 | IL_4CUV_111 | IL_1VWW_112 |
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Minor groove platform (1)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.92 | Avg 0.46 | Max 0.92
Coloring options: