Motif IL_55934.1 Version IL_55934.1 of this group appears in releases 0.5 to 1.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 1-15 | 4-14 | 8-11 | 9-10 | 14-15 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2ZJR_037 | 2ZJR | 0 | 1 | X | LSU rRNA | C | 1054 | A | 1055 | U | 1056 | G | 1058 | A | 1059 | C | 1060 | A | 1061 | G | 1062 | C | 1063 | * | G | 1118 | U | 1119 | C | 1120 | G | 1121 | A | 1122 | G | 1123 | cWW | ntSH | ncWW | cWW | ncsS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUAGACAGC*GUCGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUAGACAG*UCGA | 1 |
Release history
| Release | 0.5 | 0.6 | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2011-12-08 | 2012-04-02 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_55934.1 | Only in the parent motif |
|---|---|---|---|
| IL_03814.1 Compare | IL_2ZJR_037 | IL_3F1H_040 |
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-L-L-tSH-L-R-bif-L-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: