Motif IL_03814.1 Version IL_03814.1 of this group appears in releases 0.1 to 0.4
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 1-5 | 1-15 | 2-14 | 4-14 | 5-15 | 8-11 | 9-10 | 14-15 | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_2ZJR_037 | 2ZJR | 0.0000 | 1 | X | LSU rRNA | C | 1054 | A | 1055 | U | 1056 | G | 1058 | A | 1059 | C | 1060 | A | 1061 | G | 1062 | C | 1063 | * | G | 1118 | U | 1119 | C | 1120 | G | 1121 | A | 1122 | G | 1123 | cWW | ntSH | ncWW | cWW | ncsS | |||
2 | IL_3F1H_040 | 3F1H | 0.3881 | 1 | A | 23S RRNA | C | 1043 | G | 1044 | A | 1045 | G | 1047 | A | 1048 | C | 1049 | A | 1050 | G | 1051 | C | 1052 | * | G | 1107 | U | 1108 | C | 1109 | G | 1110 | A | 1111 | G | 1112 | csS | cWW | ntsS | ntSH | tSs | ncWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CAUAGACAGC*GUCGAG | 1 |
CGAAGACAGC*GUCGAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AUAGACAG*UCGA | 1 |
GAAGACAG*UCGA | 1 |
Release history
Release | 0.1 | 0.2 | 0.3 | 0.4 |
---|---|---|---|---|
Date | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 |
Status | New id, no parents | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
Child motif | Common motif instances | Only in IL_03814.1 | Only in the child motif |
---|---|---|---|
IL_55934.1 Compare | IL_2ZJR_037 | IL_3F1H_040 |
Coloring options: