#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9break 10 11 12 13 14 151-51-152-144-145-158-119-1014-15
1 IL_2ZJR_0372ZJR0.00001X LSU rRNAC1054A1055U1056G1058A1059C1060A1061G1062C1063*G1118U1119C1120G1121A1122G1123cWWntSHncWWcWWncsS
2 IL_3F1H_0403F1H0.38811A23S RRNAC1043G1044A1045G1047A1048C1049A1050G1051C1052*G1107U1108C1109G1110A1111G1112csScWWntsSntSHtSsncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CAUAGACAGC*GUCGAG1
CGAAGACAGC*GUCGAG1
Non-Watson-Crick part of the motif
SequenceCounts
AUAGACAG*UCGA1
GAAGACAG*UCGA1

Release history

Release0.10.20.30.4
Date2011-12-082011-12-082011-12-082011-12-08
StatusNew id, no parentsExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in IL_03814.1Only in the child motif
IL_55934.1
Compare
IL_2ZJR_037IL_3F1H_040
Annotations
  • (2)
  • Basepair signature
    Heat map statistics
    Min 0.39 | Avg 0.19 | Max 0.39
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