Motif IL_56068.1 Version IL_56068.1 of this group appears in releases 4.7 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-9 | 2-3 | 4-9 | 5-8 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8OI5_039 | 8OI5 | 0.0000 | 1 | Kink-turn related (H) | 1 | LSU rRNA | C | 973 | G | 974 | U | 975 | A | 976 | U | 977 | C | 978 | * | G | 1097 | A | 1098 | G | 1100 | cWW | ncSW | ntSs | ncHW | cWW |
| 2 | IL_9H3G_042 | 9H3G | 0.9603 | 3 | A | LSU rRNA | C | 986 | G | 987 | A | 989 | G | 991 | C | 992 | G | 993 | * | C | 1110 | G | 1111 | G | 1113 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUAUC*GAAG | 1 |
| CGGACGCG*CGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUAU*AA | 1 |
| GGACGC*GA | 1 |
Release history
| Release | 4.7 |
|---|---|
| Date | 2026-02-25 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Kink-turn related (H) (1)
- (1)
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Heat map statistics
- Min 0.96 | Avg 0.48 | Max 0.96
Coloring options: