#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4break 5 6 7 81-82-73-64-54-6
1 IL_8VMA_0018VMA0.34031CRNA (88-MER)G16U17U18G19*C22C23C24C26cWWncWWcWWcWWncWW
2 IL_5EW4_0015EW40.26230Tandem non-canonical cWW pairsB+ARNA (22-mer)C14C15C16G17*C8C9C10G11cWWcWwcBWcWW
3 IL_205D_001205D0.25490Tandem non-canonical cWW pairsA+BRNA (12-mer)U5U6U7G8*U17U18U19G20cWWcwWcWwcWW
4 IL_7A0S_0407A0S0.20010Tandem non-canonical cWW pairsX LSU rRNAA1175U1176U1177C1178*G1196U1197C1198U1199cWWcWWncWwcWW
5 IL_3TZR_0033TZR0.00000Tandem non-canonical cWW pairsA+BRNA (20-mer) + RNA (16-mer)C62U63U64C65*G102U103C104G105cWWcWWcWwcWW
6 IL_2PN3_0042PN30.13360Tandem non-canonical cWW pairsA+BRNA (24-mer) + RNA (20-mer)C62U63U64C65*G102U103C104G105cWWcWWcWwcWW
7 IL_8C3A_1358C3A0.26220Tandem non-canonical cWW pairs (H)1 LSU rRNAC3276U3277U3278A3279*U3265U3266U3267G3268cWWcWwcWwcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUUC*GUCG2
GUUG*CCCAC1
CCCG*CCCG1
UUUG*UUUG1
AUUC*GUCU1
CUUA*UUUG1
Non-Watson-Crick part of the motif
SequenceCounts
UU*UC3
UU*UU2
UU*CCA1
CC*CC1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Tandem non-canonical cWW pairs (5)
  • Tandem non-canonical cWW pairs (H) (1)
  • (1)
  • Basepair signature
    cWW-cWW-cWW-cWW
    Heat map statistics
    Min 0.13 | Avg 0.26 | Max 0.49
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