Motif IL_58262.1 Version IL_58262.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-6 | 1-7 | 2-5 | 3-4 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5AJ0_155 | 5AJ0 | 0.0000 | 1 | A2 | LSU rRNA | U | 4430 | U | 4431 | G | 4432 | * | C | 4447 | C | 4448 | A | 4449 | G | 4451 | ntHS | cWW | cWW | cWW |
| 2 | IL_3J7P_129 | 3J7P | 0.9780 | 0 | 5 | LSU rRNA | G | 4721 | G | 4722 | A | 4723 | * | U | 4579 | U | 4580 | G | 4581 | C | 4582 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUG*CCAAG | 1 |
| GGA*UUGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| U*CAA | 1 |
| G*UG | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tHS-cHW-cWW-cWW
- Heat map statistics
- Min 0.98 | Avg 0.49 | Max 0.98
Coloring options: