Motif IL_60572.1 Version IL_60572.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 1-3 | 1-8 | 2-5 | 4-7 | 5-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6CK5_011 | 6CK5 | 0.9296 | 1 | A | Guanidine-I riboswitch | U | 36 | G | 37 | U | 38 | U | 39 | G | 41 | * | C | 21 | A | 22 | G | 23 | cWW | cWH | cWW | cWW | |
| 2 | IL_4RUM_002 | 4RUM | 0.8194 | 0 | A | NiCo riboswitch | U | 38 | G | 39 | C | 40 | A | 41 | G | 42 | * | C | 20 | A | 21 | A | 22 | cWW | cWH | cWW | ||
| 3 | IL_8GLP_120 | 8GLP | 0.0000 | 0 | L5 | LSU rRNA | G | 3710 | A | 3711 | A | 3712 | U | 3713 | G | 3714 | * | C | 3739 | G | 3740 | C | 3741 | tSW | cWW | ncSW | cWW | |
| 4 | IL_8OI5_089 | 8OI5 | 0.3038 | 0 | 1 | LSU rRNA | G | 2184 | A | 2185 | A | 2186 | U | 2187 | G | 2188 | * | C | 2213 | G | 2214 | C | 2215 | ntSW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAUG*CGC | 2 |
| UGUUCG*CAG | 1 |
| UGCAG*CAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAU*G | 2 |
| GUUC*A | 1 |
| GCA*A | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-L-R-L-cWW-L
- Heat map statistics
- Min 0.30 | Avg 0.53 | Max 0.94
Coloring options: