Motif IL_61017.1 Version IL_61017.1 of this group appears in releases 3.14 to 3.61
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 3-4 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_252 | 5J7L | 0.8680 | 0 | DA | LSU rRNA | C | 269 | A | 270 | G | 271 | * | C | 366 | G | 367 | A | 368 | U | 369 | G | 370 | cWW | cWW |
| 2 | IL_6DCC_001 | 6DCC | 0.0000 | 0 | B | human 7SK RNA stem-loop 1 proximal methylated | A | 3 | U | 4 | G | 5 | * | C | 102 | C | 103 | G | 104 | C | 105 | U | 106 | cWW | cWW |
| 3 | IL_6DCC_002 | 6DCC | 0.0000 | 0 | B | human 7SK RNA stem-loop 1 proximal methylated | A | 3||||2_565 | U | 4||||2_565 | G | 5||||2_565 | * | C | 102||||2_565 | C | 103||||2_565 | G | 104||||2_565 | C | 105||||2_565 | U | 106||||2_565 | cWW | cWW |
| 4 | IL_6DCC_003 | 6DCC | 0.0000 | 0 | B | human 7SK RNA stem-loop 1 proximal methylated | A | 3||||3_455 | U | 4||||3_455 | G | 5||||3_455 | * | C | 102||||3_455 | C | 103||||3_455 | G | 104||||3_455 | C | 105||||3_455 | U | 106||||3_455 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUG*CCGCU | 3 |
| CAG*CGAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| U*CGC | 3 |
| A*GAU | 1 |
Release history
| Release | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-L-R-R-R-cWW
- Heat map statistics
- Min 0.87 | Avg 0.33 | Max 0.87
Coloring options: