Motif IL_62034.1 Version IL_62034.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 4-5 | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_5J7L_285 | 5J7L | 0.0000 | 1 | DA | LSU rRNA | C | 1076 | A | 1077 | U | 1078 | C | 1079 | * | G | 1059 | U | 1060 | G | 1062 | cWW | ncWW |
2 | IL_2OEU_002 | 2OEU | 0.7237 | 1 | A+B | Hammerhead Ribozyme + RNA (20-mer) | G | 5 | U | 6 | A | 7 | U | 9 | * | A | 12 | U | 13 | C | 14 | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CAUC*GUUG | 1 |
GUACU*AUC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AU*UU | 1 |
UAC*U | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW
- Heat map statistics
- Min 0.72 | Avg 0.36 | Max 0.72
Coloring options: