Motif IL_62552.1 Version IL_62552.1 of this group appears in releases 3.77 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 1-9 | 7-8 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_7JRS_005 | 7JRS | 0.9359 | 1 | B | RNA 3D nanocage | A | 39 | C | 41 | C | 42 | U | 43 | G | 44 | C | 45 | C | 46 | * | G | 93 | U | 94 | cWW | cWW |
| 2 | IL_7JRS_001 | 7JRS | 0.9453 | 1 | A | RNA 3D nanocage | A | 39 | C | 41 | C | 42 | U | 43 | G | 44 | C | 45 | C | 46 | * | G | 93 | U | 94 | cWW | cWW |
| 3 | IL_7UQ6_001 | 7UQ6 | 0.5279 | 2 | B | tRNA | G | 30 | G | 33 | A | 34 | A | 35 | C | 36 | C | 37 | C | 38 | * | G | 49 | C | 50 | cWW | cWW |
| 4 | IL_3R4F_001 | 3R4F | 0.0000 | 1 | A | pRNA | G | 14 | A | 16 | A | 17 | A | 18 | C | 19 | C | 20 | C | 21 | * | G | 34 | C | 35 | cWW | cWW |
| 5 | IL_7UZ0_001 | 7UZ0 | 0.5869 | 2 | A | tRNA | G | 43 | G | 46 | A | 47 | A | 48 | C | 49 | C | 50 | C | 51 | * | G | 33 | C | 34 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGCCUGCC*GU | 2 |
| GUGGAACCC*GC | 2 |
| GGAAACCC*GC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCCUGC* | 2 |
| UGGAACC* | 2 |
| GAAACC* | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (5)
- Basepair signature
- cWW-L-cWW-L-L-R-L
- Heat map statistics
- Min 0.27 | Avg 0.49 | Max 0.95
Coloring options: