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Motif IL_63702.1 Version IL_63702.1 of this group appears in releases 3.91 to 3.91

#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 5 61-62-53-43-5
1 IL_4ERD_0034ERD0.90392D+CRNA (22-mer)U119C120C123*G146G147A148cWWcWWntsS
2 IL_8AF0_0048AF00.20440Isolated non-canonical cWW pairD+CRNA (19-mer)C31C32U33*A37C38G39cWWncWW
3 IL_8C3A_4748C3A0.13590Isolated non-canonical cWW pairCM SSU rRNAU1637A1638C1639*G1735A1736A1737cWWncWwcWW
4 IL_7VFT_0037VFT0.08100Isolated non-canonical cWW pairARNA (23-mer)C11A12G13*C11||||12_555A12||||12_555G13||||12_555cWWcWW
5 IL_4J50_0024J500.00000Isolated non-canonical cWW pairA+BRNA (19-mer)C10A11G12*C10A11G12cWWcWW
6 IL_1SI3_0011SI30.16150Isolated non-canonical cWW contactBRNA (9-mer)U403G404A405*U403||||4_675G404||||4_675A405||||4_675cWWcWW
7 IL_1SI2_0021SI20.14530Isolated non-canonical cWW contactBRNA (9-mer)U403G404A405*U403||||4_675G404||||4_675A405||||4_675cWWcWW
8 IL_8P9A_4088P9A0.17030Isolated non-canonical cWW pair (H)sR SSU rRNAC646G647G648*C686G687G688cWWcWW
9 IL_8P9A_3848P9A0.23620Isolated non-canonical cWW contact (H)sR SSU rRNAA162G163A164*U150G151U152cWWcWW
10 IL_7LYF_0027LYF0.21030Isolated non-canonical cWW pairADengue virus SLAU46G47G48*C84A85A86cWWncWWncWW
11 IL_8C3A_4598C3A0.27010Isolated non-canonical cWW pairCM SSU rRNAC1308G1309A1310*U1275G1276G1277cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CAG*CAG2
UGA*UGA2
UCGAC*GGA1
CCU*ACG1
UAC*GAA1
CGG*CGG1
AGA*UGU1
UGG*CAA1
CGA*UGG1
Non-Watson-Crick part of the motif
SequenceCounts
G*G5
A*A3
CGA*G1
C*C1
G*A1

Release history

Release3.91
Date2024-12-04
StatusNew id, > 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Isolated non-canonical cWW pair (6)
  • Isolated non-canonical cWW contact (2)
  • (1)
  • Isolated non-canonical cWW contact (H) (1)
  • Isolated non-canonical cWW pair (H) (1)
    • Basepair signature
    cWW-L-R-cWW
    Heat map statistics
    Min 0.08 | Avg 0.31 | Max 0.96
    Help

    Coloring options:

    IL_4ERD_003:IL_4ERD_003 = 0IL_4ERD_003:IL_8AF0_004 = 0.8873IL_4ERD_003:IL_8C3A_474 = 0.8591IL_4ERD_003:IL_7VFT_003 = 0.9011IL_4ERD_003:IL_4J50_002 = 0.9039IL_4ERD_003:IL_1SI3_001 = 0.9558IL_4ERD_003:IL_1SI2_002 = 0.9353IL_4ERD_003:IL_8P9A_408 = 0.8736IL_4ERD_003:IL_8P9A_384 = 0.9054IL_4ERD_003:IL_7LYF_002 = 0.9232IL_4ERD_003:IL_8C3A_459 = 0.9415IL_8AF0_004:IL_4ERD_003 = 0.8873IL_8AF0_004:IL_8AF0_004 = 0IL_8AF0_004:IL_8C3A_474 = 0.1773IL_8AF0_004:IL_7VFT_003 = 0.1708IL_8AF0_004:IL_4J50_002 = 0.2044IL_8AF0_004:IL_1SI3_001 = 0.2681IL_8AF0_004:IL_1SI2_002 = 0.2784IL_8AF0_004:IL_8P9A_408 = 0.2576IL_8AF0_004:IL_8P9A_384 = 0.3472IL_8AF0_004:IL_7LYF_002 = 0.3293IL_8AF0_004:IL_8C3A_459 = 0.319IL_8C3A_474:IL_4ERD_003 = 0.8591IL_8C3A_474:IL_8AF0_004 = 0.1773IL_8C3A_474:IL_8C3A_474 = 0IL_8C3A_474:IL_7VFT_003 = 0.1297IL_8C3A_474:IL_4J50_002 = 0.1359IL_8C3A_474:IL_1SI3_001 = 0.1992IL_8C3A_474:IL_1SI2_002 = 0.1818IL_8C3A_474:IL_8P9A_408 = 0.1699IL_8C3A_474:IL_8P9A_384 = 0.244IL_8C3A_474:IL_7LYF_002 = 0.2434IL_8C3A_474:IL_8C3A_459 = 0.2467IL_7VFT_003:IL_4ERD_003 = 0.9011IL_7VFT_003:IL_8AF0_004 = 0.1708IL_7VFT_003:IL_8C3A_474 = 0.1297IL_7VFT_003:IL_7VFT_003 = 0IL_7VFT_003:IL_4J50_002 = 0.081IL_7VFT_003:IL_1SI3_001 = 0.1685IL_7VFT_003:IL_1SI2_002 = 0.1643IL_7VFT_003:IL_8P9A_408 = 0.1652IL_7VFT_003:IL_8P9A_384 = 0.2608IL_7VFT_003:IL_7LYF_002 = 0.2472IL_7VFT_003:IL_8C3A_459 = 0.2866IL_4J50_002:IL_4ERD_003 = 0.9039IL_4J50_002:IL_8AF0_004 = 0.2044IL_4J50_002:IL_8C3A_474 = 0.1359IL_4J50_002:IL_7VFT_003 = 0.081IL_4J50_002:IL_4J50_002 = 0IL_4J50_002:IL_1SI3_001 = 0.1615IL_4J50_002:IL_1SI2_002 = 0.1453IL_4J50_002:IL_8P9A_408 = 0.1703IL_4J50_002:IL_8P9A_384 = 0.2362IL_4J50_002:IL_7LYF_002 = 0.2103IL_4J50_002:IL_8C3A_459 = 0.2701IL_1SI3_001:IL_4ERD_003 = 0.9558IL_1SI3_001:IL_8AF0_004 = 0.2681IL_1SI3_001:IL_8C3A_474 = 0.1992IL_1SI3_001:IL_7VFT_003 = 0.1685IL_1SI3_001:IL_4J50_002 = 0.1615IL_1SI3_001:IL_1SI3_001 = 0IL_1SI3_001:IL_1SI2_002 = 0.0849IL_1SI3_001:IL_8P9A_408 = 0.1768IL_1SI3_001:IL_8P9A_384 = 0.1919IL_1SI3_001:IL_7LYF_002 = 0.2387IL_1SI3_001:IL_8C3A_459 = 0.2883IL_1SI2_002:IL_4ERD_003 = 0.9353IL_1SI2_002:IL_8AF0_004 = 0.2784IL_1SI2_002:IL_8C3A_474 = 0.1818IL_1SI2_002:IL_7VFT_003 = 0.1643IL_1SI2_002:IL_4J50_002 = 0.1453IL_1SI2_002:IL_1SI3_001 = 0.0849IL_1SI2_002:IL_1SI2_002 = 0IL_1SI2_002:IL_8P9A_408 = 0.1477IL_1SI2_002:IL_8P9A_384 = 0.1743IL_1SI2_002:IL_7LYF_002 = 0.207IL_1SI2_002:IL_8C3A_459 = 0.2607IL_8P9A_408:IL_4ERD_003 = 0.8736IL_8P9A_408:IL_8AF0_004 = 0.2576IL_8P9A_408:IL_8C3A_474 = 0.1699IL_8P9A_408:IL_7VFT_003 = 0.1652IL_8P9A_408:IL_4J50_002 = 0.1703IL_8P9A_408:IL_1SI3_001 = 0.1768IL_8P9A_408:IL_1SI2_002 = 0.1477IL_8P9A_408:IL_8P9A_408 = 0IL_8P9A_408:IL_8P9A_384 = 0.1798IL_8P9A_408:IL_7LYF_002 = 0.224IL_8P9A_408:IL_8C3A_459 = 0.2482IL_8P9A_384:IL_4ERD_003 = 0.9054IL_8P9A_384:IL_8AF0_004 = 0.3472IL_8P9A_384:IL_8C3A_474 = 0.244IL_8P9A_384:IL_7VFT_003 = 0.2608IL_8P9A_384:IL_4J50_002 = 0.2362IL_8P9A_384:IL_1SI3_001 = 0.1919IL_8P9A_384:IL_1SI2_002 = 0.1743IL_8P9A_384:IL_8P9A_408 = 0.1798IL_8P9A_384:IL_8P9A_384 = 0IL_8P9A_384:IL_7LYF_002 = 0.198IL_8P9A_384:IL_8C3A_459 = 0.2665IL_7LYF_002:IL_4ERD_003 = 0.9232IL_7LYF_002:IL_8AF0_004 = 0.3293IL_7LYF_002:IL_8C3A_474 = 0.2434IL_7LYF_002:IL_7VFT_003 = 0.2472IL_7LYF_002:IL_4J50_002 = 0.2103IL_7LYF_002:IL_1SI3_001 = 0.2387IL_7LYF_002:IL_1SI2_002 = 0.207IL_7LYF_002:IL_8P9A_408 = 0.224IL_7LYF_002:IL_8P9A_384 = 0.198IL_7LYF_002:IL_7LYF_002 = 0IL_7LYF_002:IL_8C3A_459 = 0.2486IL_8C3A_459:IL_4ERD_003 = 0.9415IL_8C3A_459:IL_8AF0_004 = 0.319IL_8C3A_459:IL_8C3A_474 = 0.2467IL_8C3A_459:IL_7VFT_003 = 0.2866IL_8C3A_459:IL_4J50_002 = 0.2701IL_8C3A_459:IL_1SI3_001 = 0.2883IL_8C3A_459:IL_1SI2_002 = 0.2607IL_8C3A_459:IL_8P9A_408 = 0.2482IL_8C3A_459:IL_8P9A_384 = 0.2665IL_8C3A_459:IL_7LYF_002 = 0.2486IL_8C3A_459:IL_8C3A_459 = 0IL_4ERD_003IL_8AF0_004IL_8C3A_474IL_7VFT_003IL_4J50_002IL_1SI3_001IL_1SI2_002IL_8P9A_408IL_8P9A_384IL_7LYF_002IL_8C3A_459Discrepancy0.000.200.400.600.80
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