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Motif IL_63702.3 Version IL_63702.3 of this group appears in releases 3.94 to 3.94

#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 5 61-62-53-4
1 IL_8AF0_0048AF00.27840Isolated non-canonical cWW pairC+DRNA (19-mer)A37C38G39*C31C32U33ncWWcWW
2 IL_8C3A_4748C3A0.18180Isolated non-canonical cWW pairCM SSU rRNAU1637A1638C1639*G1735A1736A1737cWWncWwcWW
3 IL_7VFT_0037VFT0.16430Isolated non-canonical cWW pairARNA (23-mer)C11A12G13*C11||||12_555A12||||12_555G13||||12_555cWWcWW
4 IL_4J50_0024J500.14530Isolated non-canonical cWW pairA+BRNA (19-mer)C10A11G12*C10A11G12cWWcWW
5 IL_1SI3_0011SI30.08490Isolated non-canonical cWW contactBRNA (9-mer)U403G404A405*U403||||4_675G404||||4_675A405||||4_675cWWcWW
6 IL_1SI2_0021SI20.00000Isolated non-canonical cWW contactBRNA (9-mer)U403G404A405*U403||||4_675G404||||4_675A405||||4_675cWWcWW
7 IL_8P9A_4088P9A0.14770Isolated non-canonical cWW pair (H)sR SSU rRNAC686G687G688*C646G647G648cWWcWW
8 IL_8P9A_3848P9A0.17430Isolated non-canonical cWW contact (H)sR SSU rRNAU150G151U152*A162G163A164cWWcWW
9 IL_7LYF_0027LYF0.20700Isolated non-canonical cWW pairADengue virus SLAC84A85A86*U46G47G48ncWWncWWcWW
10 IL_5UNE_0095UNE0.21690Isolated non-canonical cWW contactA+BRNA (47-MER)U39G40G41*U7G8A9cWWncWW
11 IL_5UNE_0015UNE0.19120Isolated non-canonical cWW contactB+ARNA (47-MER)U39G40G41*U7G8A9cWWncWwcWW
12 IL_4AOB_0054AOB0.24750Isolated non-canonical cWW pairA SAM-I riboswitchC78G79U80*G71A72G73cWWncWWcWW
13 IL_8C3A_4598C3A0.26070Isolated non-canonical cWW pairCM SSU rRNAU1275G1276G1277*C1308G1309A1310cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CAG*CAG2
UGA*UGA2
UGG*UGA2
ACG*CCU1
UAC*GAA1
CGG*CGG1
UGU*AGA1
CAA*UGG1
CGU*GAG1
UGG*CGA1
Non-Watson-Crick part of the motif
SequenceCounts
G*G7
A*A3
C*C1
A*G1
G*A1

Release history

Release3.94
Date2025-02-26
StatusUpdated, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Isolated non-canonical cWW pair (7)
  • Isolated non-canonical cWW contact (4)
  • Isolated non-canonical cWW contact (H) (1)
  • Isolated non-canonical cWW pair (H) (1)
    • Basepair signature
    cWW-L-R-cWW
    Heat map statistics
    Min 0.08 | Avg 0.21 | Max 0.38
    Help

    Coloring options:

    IL_8AF0_004:IL_8AF0_004 = 0IL_8AF0_004:IL_8C3A_474 = 0.1773IL_8AF0_004:IL_7VFT_003 = 0.1708IL_8AF0_004:IL_4J50_002 = 0.2044IL_8AF0_004:IL_1SI3_001 = 0.2681IL_8AF0_004:IL_1SI2_002 = 0.2784IL_8AF0_004:IL_8P9A_408 = 0.2576IL_8AF0_004:IL_8P9A_384 = 0.3472IL_8AF0_004:IL_7LYF_002 = 0.3293IL_8AF0_004:IL_5UNE_009 = 0.3788IL_8AF0_004:IL_5UNE_001 = 0.3095IL_8AF0_004:IL_4AOB_005 = 0.2946IL_8AF0_004:IL_8C3A_459 = 0.319IL_8C3A_474:IL_8AF0_004 = 0.1773IL_8C3A_474:IL_8C3A_474 = 0IL_8C3A_474:IL_7VFT_003 = 0.1297IL_8C3A_474:IL_4J50_002 = 0.1359IL_8C3A_474:IL_1SI3_001 = 0.1992IL_8C3A_474:IL_1SI2_002 = 0.1818IL_8C3A_474:IL_8P9A_408 = 0.1699IL_8C3A_474:IL_8P9A_384 = 0.244IL_8C3A_474:IL_7LYF_002 = 0.2434IL_8C3A_474:IL_5UNE_009 = 0.295IL_8C3A_474:IL_5UNE_001 = 0.2394IL_8C3A_474:IL_4AOB_005 = 0.2698IL_8C3A_474:IL_8C3A_459 = 0.2467IL_7VFT_003:IL_8AF0_004 = 0.1708IL_7VFT_003:IL_8C3A_474 = 0.1297IL_7VFT_003:IL_7VFT_003 = 0IL_7VFT_003:IL_4J50_002 = 0.081IL_7VFT_003:IL_1SI3_001 = 0.1685IL_7VFT_003:IL_1SI2_002 = 0.1643IL_7VFT_003:IL_8P9A_408 = 0.1652IL_7VFT_003:IL_8P9A_384 = 0.2608IL_7VFT_003:IL_7LYF_002 = 0.2472IL_7VFT_003:IL_5UNE_009 = 0.31IL_7VFT_003:IL_5UNE_001 = 0.2318IL_7VFT_003:IL_4AOB_005 = 0.2545IL_7VFT_003:IL_8C3A_459 = 0.2866IL_4J50_002:IL_8AF0_004 = 0.2044IL_4J50_002:IL_8C3A_474 = 0.1359IL_4J50_002:IL_7VFT_003 = 0.081IL_4J50_002:IL_4J50_002 = 0IL_4J50_002:IL_1SI3_001 = 0.1615IL_4J50_002:IL_1SI2_002 = 0.1453IL_4J50_002:IL_8P9A_408 = 0.1703IL_4J50_002:IL_8P9A_384 = 0.2362IL_4J50_002:IL_7LYF_002 = 0.2103IL_4J50_002:IL_5UNE_009 = 0.2816IL_4J50_002:IL_5UNE_001 = 0.2178IL_4J50_002:IL_4AOB_005 = 0.2427IL_4J50_002:IL_8C3A_459 = 0.2701IL_1SI3_001:IL_8AF0_004 = 0.2681IL_1SI3_001:IL_8C3A_474 = 0.1992IL_1SI3_001:IL_7VFT_003 = 0.1685IL_1SI3_001:IL_4J50_002 = 0.1615IL_1SI3_001:IL_1SI3_001 = 0IL_1SI3_001:IL_1SI2_002 = 0.0849IL_1SI3_001:IL_8P9A_408 = 0.1768IL_1SI3_001:IL_8P9A_384 = 0.1919IL_1SI3_001:IL_7LYF_002 = 0.2387IL_1SI3_001:IL_5UNE_009 = 0.2016IL_1SI3_001:IL_5UNE_001 = 0.1761IL_1SI3_001:IL_4AOB_005 = 0.2098IL_1SI3_001:IL_8C3A_459 = 0.2883IL_1SI2_002:IL_8AF0_004 = 0.2784IL_1SI2_002:IL_8C3A_474 = 0.1818IL_1SI2_002:IL_7VFT_003 = 0.1643IL_1SI2_002:IL_4J50_002 = 0.1453IL_1SI2_002:IL_1SI3_001 = 0.0849IL_1SI2_002:IL_1SI2_002 = 0IL_1SI2_002:IL_8P9A_408 = 0.1477IL_1SI2_002:IL_8P9A_384 = 0.1743IL_1SI2_002:IL_7LYF_002 = 0.207IL_1SI2_002:IL_5UNE_009 = 0.2169IL_1SI2_002:IL_5UNE_001 = 0.1912IL_1SI2_002:IL_4AOB_005 = 0.2475IL_1SI2_002:IL_8C3A_459 = 0.2607IL_8P9A_408:IL_8AF0_004 = 0.2576IL_8P9A_408:IL_8C3A_474 = 0.1699IL_8P9A_408:IL_7VFT_003 = 0.1652IL_8P9A_408:IL_4J50_002 = 0.1703IL_8P9A_408:IL_1SI3_001 = 0.1768IL_8P9A_408:IL_1SI2_002 = 0.1477IL_8P9A_408:IL_8P9A_408 = 0IL_8P9A_408:IL_8P9A_384 = 0.1798IL_8P9A_408:IL_7LYF_002 = 0.224IL_8P9A_408:IL_5UNE_009 = 0.278IL_8P9A_408:IL_5UNE_001 = 0.2272IL_8P9A_408:IL_4AOB_005 = 0.2952IL_8P9A_408:IL_8C3A_459 = 0.2482IL_8P9A_384:IL_8AF0_004 = 0.3472IL_8P9A_384:IL_8C3A_474 = 0.244IL_8P9A_384:IL_7VFT_003 = 0.2608IL_8P9A_384:IL_4J50_002 = 0.2362IL_8P9A_384:IL_1SI3_001 = 0.1919IL_8P9A_384:IL_1SI2_002 = 0.1743IL_8P9A_384:IL_8P9A_408 = 0.1798IL_8P9A_384:IL_8P9A_384 = 0IL_8P9A_384:IL_7LYF_002 = 0.198IL_8P9A_384:IL_5UNE_009 = 0.2194IL_8P9A_384:IL_5UNE_001 = 0.231IL_8P9A_384:IL_4AOB_005 = 0.2806IL_8P9A_384:IL_8C3A_459 = 0.2665IL_7LYF_002:IL_8AF0_004 = 0.3293IL_7LYF_002:IL_8C3A_474 = 0.2434IL_7LYF_002:IL_7VFT_003 = 0.2472IL_7LYF_002:IL_4J50_002 = 0.2103IL_7LYF_002:IL_1SI3_001 = 0.2387IL_7LYF_002:IL_1SI2_002 = 0.207IL_7LYF_002:IL_8P9A_408 = 0.224IL_7LYF_002:IL_8P9A_384 = 0.198IL_7LYF_002:IL_7LYF_002 = 0IL_7LYF_002:IL_5UNE_009 = 0.2563IL_7LYF_002:IL_5UNE_001 = 0.2471IL_7LYF_002:IL_4AOB_005 = 0.3003IL_7LYF_002:IL_8C3A_459 = 0.2486IL_5UNE_009:IL_8AF0_004 = 0.3788IL_5UNE_009:IL_8C3A_474 = 0.295IL_5UNE_009:IL_7VFT_003 = 0.31IL_5UNE_009:IL_4J50_002 = 0.2816IL_5UNE_009:IL_1SI3_001 = 0.2016IL_5UNE_009:IL_1SI2_002 = 0.2169IL_5UNE_009:IL_8P9A_408 = 0.278IL_5UNE_009:IL_8P9A_384 = 0.2194IL_5UNE_009:IL_7LYF_002 = 0.2563IL_5UNE_009:IL_5UNE_009 = 0IL_5UNE_009:IL_5UNE_001 = 0.1971IL_5UNE_009:IL_4AOB_005 = 0.2398IL_5UNE_009:IL_8C3A_459 = 0.2579IL_5UNE_001:IL_8AF0_004 = 0.3095IL_5UNE_001:IL_8C3A_474 = 0.2394IL_5UNE_001:IL_7VFT_003 = 0.2318IL_5UNE_001:IL_4J50_002 = 0.2178IL_5UNE_001:IL_1SI3_001 = 0.1761IL_5UNE_001:IL_1SI2_002 = 0.1912IL_5UNE_001:IL_8P9A_408 = 0.2272IL_5UNE_001:IL_8P9A_384 = 0.231IL_5UNE_001:IL_7LYF_002 = 0.2471IL_5UNE_001:IL_5UNE_009 = 0.1971IL_5UNE_001:IL_5UNE_001 = 0IL_5UNE_001:IL_4AOB_005 = 0.2238IL_5UNE_001:IL_8C3A_459 = 0.2512IL_4AOB_005:IL_8AF0_004 = 0.2946IL_4AOB_005:IL_8C3A_474 = 0.2698IL_4AOB_005:IL_7VFT_003 = 0.2545IL_4AOB_005:IL_4J50_002 = 0.2427IL_4AOB_005:IL_1SI3_001 = 0.2098IL_4AOB_005:IL_1SI2_002 = 0.2475IL_4AOB_005:IL_8P9A_408 = 0.2952IL_4AOB_005:IL_8P9A_384 = 0.2806IL_4AOB_005:IL_7LYF_002 = 0.3003IL_4AOB_005:IL_5UNE_009 = 0.2398IL_4AOB_005:IL_5UNE_001 = 0.2238IL_4AOB_005:IL_4AOB_005 = 0IL_4AOB_005:IL_8C3A_459 = 0.2984IL_8C3A_459:IL_8AF0_004 = 0.319IL_8C3A_459:IL_8C3A_474 = 0.2467IL_8C3A_459:IL_7VFT_003 = 0.2866IL_8C3A_459:IL_4J50_002 = 0.2701IL_8C3A_459:IL_1SI3_001 = 0.2883IL_8C3A_459:IL_1SI2_002 = 0.2607IL_8C3A_459:IL_8P9A_408 = 0.2482IL_8C3A_459:IL_8P9A_384 = 0.2665IL_8C3A_459:IL_7LYF_002 = 0.2486IL_8C3A_459:IL_5UNE_009 = 0.2579IL_8C3A_459:IL_5UNE_001 = 0.2512IL_8C3A_459:IL_4AOB_005 = 0.2984IL_8C3A_459:IL_8C3A_459 = 0IL_8AF0_004IL_8C3A_474IL_7VFT_003IL_4J50_002IL_1SI3_001IL_1SI2_002IL_8P9A_408IL_8P9A_384IL_7LYF_002IL_5UNE_009IL_5UNE_001IL_4AOB_005IL_8C3A_459Discrepancy0.000.100.200.30
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