#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3break 4 5 6 7 81-82-53-46-7
1 IL_2QBG_0152QBG0.00000B LSU rRNAU293A294G295*C343A344A345A346A347cWWntHScWW
2 IL_4QCN_0124QCN0.42080A LSU rRNAU317A318G319*C367G368A369A370A371cWWcWWcSH

3D structures

Complete motif including flanking bases
SequenceCounts
UAG*CAAAA1
UAG*CGAAA1
Non-Watson-Crick part of the motif
SequenceCounts
A*AAA1
A*GAA1

Release history

Release1.18
Date2014-10-07
StatusUpdated, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_63917.2Only in the parent motif
IL_63917.1
Compare
IL_2QBG_015, IL_4QCN_012IL_1VWW_041

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-L-R-R-R-cWW
    Heat map statistics
    Min 0.42 | Avg 0.21 | Max 0.42
    Help

    Coloring options:

    IL_2QBG_015:IL_2QBG_015 = 0IL_2QBG_015:IL_4QCN_012 = 0.4208IL_4QCN_012:IL_2QBG_015 = 0.4208IL_4QCN_012:IL_4QCN_012 = 0IL_2QBG_015IL_4QCN_012Discrepancy0.000.100.200.300.40
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