Motif IL_63917.2 Version IL_63917.2 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-5 | 3-4 | 6-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2QBG_015 | 2QBG | 0.0000 | 0 | B | LSU rRNA | U | 293 | A | 294 | G | 295 | * | C | 343 | A | 344 | A | 345 | A | 346 | A | 347 | cWW | ntHS | cWW | |
| 2 | IL_4QCN_012 | 4QCN | 0.4208 | 0 | A | LSU rRNA | U | 317 | A | 318 | G | 319 | * | C | 367 | G | 368 | A | 369 | A | 370 | A | 371 | cWW | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAG*CAAAA | 1 |
| UAG*CGAAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*AAA | 1 |
| A*GAA | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | Updated, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_63917.2 | Only in the parent motif |
|---|---|---|---|
| IL_63917.1 Compare | IL_2QBG_015, IL_4QCN_012 | IL_1VWW_041 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-R-R-cWW
- Heat map statistics
- Min 0.42 | Avg 0.21 | Max 0.42
Coloring options: