Motif IL_65594.1 Version IL_65594.1 of this group appears in releases 3.95 to 3.98

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3		4		5		6		7		8	break		9		10		11		12		13		14		15	1-15	3-13	4-12	5-6	6-11	7-10	8-9
1	IL_8CRE_006	8CRE	0.0000	0		1	LSU rRNA	C	81	U	82	C	83	A	84	G	85	U	86	A	87	G	88	*	U	96	G	97	A	98	A	99	G	100	C	101	G	102	cWW	tSW	tHH	cSH	tWH	tHS	cWW
2	IL_8P9A_235	8P9A	0.0779	0	8x7 Sarcin-Ricin; G-bulge (H)	AR	LSU rRNA	C	82	U	83	U	84	A	85	G	86	U	87	A	88	A	89	*	U	97	G	98	A	99	A	100	G	101	C	102	G	103	cWW	tSW	tHH	cSH	tWH	tHS	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CUCAGUAG*UGAAGCG	1
CUUAGUAA*UGAAGCG	1

Non-Watson-Crick part of the motif

Sequence	Counts
UCAGUA*GAAGC	1
UUAGUA*GAAGC	1

Release history

Release	3.95	3.96	3.97	3.98
Date	2025-03-26	2025-04-23	2025-05-21	2025-06-18
Status	New id, 1 parent	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (1)
8x7 Sarcin-Ricin; G-bulge (H) (1)
Basepair signature: cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
Heat map statistics: Min 0.08 | Avg 0.04 | Max 0.08

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