Motif IL_66196.1 Version IL_66196.1 of this group appears in releases 3.56 to 3.61
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-10 | 4-9 | 5-8 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1L9A_006 | 1L9A | 0.0000 | 1 | B | SRP RNA | U | 181 | G | 182 | A | 184 | C | 185 | C | 186 | G | 187 | * | C | 212 | A | 213 | A | 214 | A | 215 | A | 216 | cWW | ntHH | ncWWa | cWW | ||
| 2 | IL_4V88_393 | 4V88 | 0.6083 | 0 | A6 | SSU rRNA | U | 117 | U | 118 | A | 119 | U | 120 | U | 121 | U | 122 | * | A | 295 | U | 296 | U | 297 | C | 298 | A | 299 | cWW | ntHS | cWw | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAACCG*CAAAA | 1 |
| UUAUUU*AUUCA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAACC*AAA | 1 |
| UAUU*UUC | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW-cWW-cWW
- Heat map statistics
- Min 0.61 | Avg 0.30 | Max 0.61
Coloring options: