Motif IL_67005.1 Version IL_67005.1 of this group appears in releases 1.17 to 1.17
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | break | 3 | 4 | 5 | 6 | 1-6 | 2-3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1NTB_004 | 1NTB | 0.0000 | 2 | A+B | C | 18 | U | 19 | * | A | 105 | C | 106 | A | 108 | G | 110 | cWW | cWW |
| 2 | IL_4QCN_050 | 4QCN | 0.7344 | 1 | A | U | 1461 | G | 1462 | * | C | 1629 | A | 1630 | A | 1632 | A | 1633 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CU*ACCACG | 1 |
| UG*CACAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *CCAC | 1 |
| *ACA | 1 |
Release history
| Release | 1.17 |
|---|---|
| Date | 2014-09-04 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_67005.1 | Only in the parent motif |
|---|---|---|---|
| IL_98601.1 Compare | IL_1NTB_004 | IL_4QCN_050 | IL_4CUV_087, IL_4NVV_053, IL_3U5H_088 |
Children motifs
| Child motif | Common motif instances | Only in IL_67005.1 | Only in the child motif |
|---|---|---|---|
| IL_04466.1 Compare | IL_4QCN_050, IL_1NTB_004 | IL_4CUV_087, IL_3U5H_088 |
- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-cWW
- Heat map statistics
- Min 0.73 | Avg 0.37 | Max 0.73
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