#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2break 3 4 5 61-62-3
1 IL_4QCN_0504QCN0.96511A23S Ribosomal RNAU1461G1462*C1629A1630A1632A1633cWWcWW
2 IL_1NTB_0041NTB0.68602A+BRNA (22-mer) + RNA (18-mer)C18U19*A105C106A108G110cWWcWW
3 IL_3U5H_0883U5H0.00000525S rRNAG1947G1948*C2098A2099A2100C2101cWWcWW
4 IL_4CUV_0874CUV0.17400125S RRNAG1947G1948*C2098A2099A2100C2101cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GG*CAAC2
UG*CACAA1
CU*ACCACG1
Non-Watson-Crick part of the motif
SequenceCounts
*AA2
*ACA1
*CCAC1

Release history

Release1.18
Date2014-10-07
StatusNew id, 2 parents

Parent motifs

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-R-R-cWW
    Heat map statistics
    Min 0.17 | Avg 0.54 | Max 1.00
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.4587 s