Motif IL_67024.1 Version IL_67024.1 of this group appears in releases 1.14 to 1.18
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-4 | 5-6 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_2QBG_002 | 2QBG | 0.0000 | 1 | A | 5S rRNA | G | 23 | G | 24 | C | 26 | C | 27 | C | 28 | * | G | 56 | A | 57 | A | 58 | A | 59 | C | 60 | cWW | tSW | cWW |
2 | IL_4IOA_105 | 4IOA | 0.2730 | 1 | Y | 5S rRNA | G | 25 | G | 26 | A | 28 | C | 29 | C | 30 | * | G | 58 | A | 59 | A | 60 | A | 61 | C | 62 | cWW | ntSW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GGUCCC*GAAAC | 1 |
GGAACC*GAAAC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GUCC*AAA | 1 |
GAAC*AAA | 1 |
Release history
Release | 1.14 | 1.15 | 1.17 | 1.18 |
---|---|---|---|---|
Date | 2014-04-27 | 2014-06-20 | 2014-09-04 | 2014-10-07 |
Status | New id, 2 parents | Exact match | Exact match | Exact match |
Parent motifs
Parent motif | Common motif instances | Only in IL_67024.1 | Only in the parent motif |
---|---|---|---|
IL_46721.1 Compare | IL_4IOA_105 | IL_2QBG_002 | |
IL_23262.4 Compare | IL_2QBG_002 | IL_4IOA_105 | IL_3V2F_108 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-tSW-L-cWW
- Heat map statistics
- Min 0.27 | Avg 0.14 | Max 0.27
Coloring options: