#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7 8 9 101-102-45-6
1 IL_2QBG_0022QBG0.00001A5S rRNAG23G24C26C27C28*G56A57A58A59C60cWWtSWcWW
2 IL_4IOA_1054IOA0.27301Y 5S rRNAG25G26A28C29C30*G58A59A60A61C62cWWntSWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGUCCC*GAAAC1
GGAACC*GAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
GUCC*AAA1
GAAC*AAA1

Release history

Release1.141.151.171.18
Date2014-04-272014-06-202014-09-042014-10-07
StatusNew id, 2 parentsExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_67024.1Only in the parent motif
IL_46721.1
Compare
IL_4IOA_105IL_2QBG_002
IL_23262.4
Compare
IL_2QBG_002IL_4IOA_105IL_3V2F_108

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-R-R-R-tSW-L-cWW
    Heat map statistics
    Min 0.27 | Avg 0.14 | Max 0.27
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.1017 s