Motif IL_67703.1 Version IL_67703.1 of this group appears in releases 3.2 to 3.47
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 1-22 | 2-21 | 5-10 | 6-9 | 7-8 | 13-14 | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_281 | 5J7L | 0.0000 | 2 | DA | LSU rRNA | G | 1024 | G | 1025 | G | 1026 | A | 1027 | A | 1028 | A | 1029 | C | 1030 | * | G | 1124 | G | 1125 | A | 1126 | G | 1128 | A | 1129 | G | 1131 | U | 1132 | A | 1133 | A | 1134 | C | 1135 | G | 1136 | G | 1137 | G | 1138 | G | 1139 | C | 1140 | cWW | tWW | tHH | tHS | cWW | cSH |
| 2 | IL_4IOA_036 | 4IOA | 0.7417 | 1 | X | LSU rRNA | G | 1035 | G | 1036 | U | 1037 | U | 1038 | A | 1039 | A | 1040 | G | 1041 | * | C | 1135 | G | 1136 | A | 1137 | A | 1139 | A | 1140 | U | 1141 | G | 1142 | A | 1143 | U | 1144 | C | 1145 | G | 1146 | G | 1147 | G | 1148 | G | 1149 | C | 1150 | cWW | tWW | tHH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGGAAAC*GGAAGAUGUAACGGGGC | 1 |
| GGUUAAG*CGAAAAUGAUCGGGGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGAAA*GAAGAUGUAACGGGG | 1 |
| GUUAA*GAAAAUGAUCGGGG | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tWW-L-tWH-R-R-R-R-cSH-R-R-L-tHH-tHS-cWW
- Heat map statistics
- Min 0.74 | Avg 0.37 | Max 0.74
Coloring options: