#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name for chain 1 2 3 4 5break 6 7 8 91-92-73-43-84-85-6
1 IL_5XTM_0085XTM0.17600Receptor of 11-nt loop-receptor motifDRNA (47-MER)C41U42A43A44G45*U3A4U5G6cWWtWHcSHntSHcWWcWW
2 IL_5DCV_0105DCV0.12280Receptor of 11-nt loop-receptor motifDRNA (47-MER)C45U46A47A48G49*U3A4U5G6cWWtWHcSHntSHcWWcWW
3 IL_3IGI_0123IGI0.10690Receptor of 11-nt loop-receptor motifAGroup IIC intronC346U347A348A349G350*U332A333U334G335cWWtWHcSHncWWcWW
4 IL_1GID_0141GID0.09780Receptor of 11-nt loop-receptor motifBP4-P6 RNA RIBOZYME DOMAINC223U224A225A226G227*U247A248U249G250cWWtWHcSHncWWcWW
5 IL_1U6B_0131U6B0.00000Receptor of 11-nt loop-receptor motifB197-MERC147U148A149A150G151*U160A161U162G163cWWtWHcSHcWWcWW
6 IL_5VCI_0065VCI0.11610Receptor of 11-nt loop-receptor motifA+BRNA (22-mer) + RNA (12-mer)C8U9A10A11G12*U2A3U4G5cWWtWHcSHcWWcWW
7 IL_4PCJ_0054PCJ0.13120Receptor of 11-nt loop-receptor motifAtrCUG-3('5)C8U9A10A11G12*U25A26U27G28cWWtWHcSHcWWcWW
8 IL_1U6B_0031U6B0.18190Receptor of 11-nt loop-receptor motifB197-MERC61U62A63A64G65*U80A81U82G83cWWtWHcSHncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUAAG*UAUG8
Non-Watson-Crick part of the motif
SequenceCounts
UAA*AU8

Release history

Release3.95
Date2025-03-26
StatusUpdated, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Receptor of 11-nt loop-receptor motif (8)
  • Basepair signature
    cWW-tWH-cWW-cSH-cWW
    Heat map statistics
    Min 0.07 | Avg 0.13 | Max 0.23
    Help

    Coloring options:

    IL_5XTM_008:IL_5XTM_008 = 0IL_5XTM_008:IL_5DCV_010 = 0.1459IL_5XTM_008:IL_3IGI_012 = 0.1948IL_5XTM_008:IL_1GID_014 = 0.1857IL_5XTM_008:IL_1U6B_013 = 0.176IL_5XTM_008:IL_5VCI_006 = 0.1723IL_5XTM_008:IL_4PCJ_005 = 0.1921IL_5XTM_008:IL_1U6B_003 = 0.2281IL_5DCV_010:IL_5XTM_008 = 0.1459IL_5DCV_010:IL_5DCV_010 = 0IL_5DCV_010:IL_3IGI_012 = 0.1337IL_5DCV_010:IL_1GID_014 = 0.1251IL_5DCV_010:IL_1U6B_013 = 0.1228IL_5DCV_010:IL_5VCI_006 = 0.1323IL_5DCV_010:IL_4PCJ_005 = 0.1441IL_5DCV_010:IL_1U6B_003 = 0.2018IL_3IGI_012:IL_5XTM_008 = 0.1948IL_3IGI_012:IL_5DCV_010 = 0.1337IL_3IGI_012:IL_3IGI_012 = 0IL_3IGI_012:IL_1GID_014 = 0.1047IL_3IGI_012:IL_1U6B_013 = 0.1069IL_3IGI_012:IL_5VCI_006 = 0.1335IL_3IGI_012:IL_4PCJ_005 = 0.1462IL_3IGI_012:IL_1U6B_003 = 0.2299IL_1GID_014:IL_5XTM_008 = 0.1857IL_1GID_014:IL_5DCV_010 = 0.1251IL_1GID_014:IL_3IGI_012 = 0.1047IL_1GID_014:IL_1GID_014 = 0IL_1GID_014:IL_1U6B_013 = 0.0978IL_1GID_014:IL_5VCI_006 = 0.1222IL_1GID_014:IL_4PCJ_005 = 0.1285IL_1GID_014:IL_1U6B_003 = 0.1942IL_1U6B_013:IL_5XTM_008 = 0.176IL_1U6B_013:IL_5DCV_010 = 0.1228IL_1U6B_013:IL_3IGI_012 = 0.1069IL_1U6B_013:IL_1GID_014 = 0.0978IL_1U6B_013:IL_1U6B_013 = 0IL_1U6B_013:IL_5VCI_006 = 0.1161IL_1U6B_013:IL_4PCJ_005 = 0.1312IL_1U6B_013:IL_1U6B_003 = 0.1819IL_5VCI_006:IL_5XTM_008 = 0.1723IL_5VCI_006:IL_5DCV_010 = 0.1323IL_5VCI_006:IL_3IGI_012 = 0.1335IL_5VCI_006:IL_1GID_014 = 0.1222IL_5VCI_006:IL_1U6B_013 = 0.1161IL_5VCI_006:IL_5VCI_006 = 0IL_5VCI_006:IL_4PCJ_005 = 0.0671IL_5VCI_006:IL_1U6B_003 = 0.1995IL_4PCJ_005:IL_5XTM_008 = 0.1921IL_4PCJ_005:IL_5DCV_010 = 0.1441IL_4PCJ_005:IL_3IGI_012 = 0.1462IL_4PCJ_005:IL_1GID_014 = 0.1285IL_4PCJ_005:IL_1U6B_013 = 0.1312IL_4PCJ_005:IL_5VCI_006 = 0.0671IL_4PCJ_005:IL_4PCJ_005 = 0IL_4PCJ_005:IL_1U6B_003 = 0.2003IL_1U6B_003:IL_5XTM_008 = 0.2281IL_1U6B_003:IL_5DCV_010 = 0.2018IL_1U6B_003:IL_3IGI_012 = 0.2299IL_1U6B_003:IL_1GID_014 = 0.1942IL_1U6B_003:IL_1U6B_013 = 0.1819IL_1U6B_003:IL_5VCI_006 = 0.1995IL_1U6B_003:IL_4PCJ_005 = 0.2003IL_1U6B_003:IL_1U6B_003 = 0IL_5XTM_008IL_5DCV_010IL_3IGI_012IL_1GID_014IL_1U6B_013IL_5VCI_006IL_4PCJ_005IL_1U6B_003Discrepancy0.000.050.100.150.20
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