#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10 11 121-122-114-115-106-97-8
1 IL_3Q3Z_0023Q3Z0.23321Kink-turnVCyclic di-GMP-II riboswitchC16A17A18G20A21U22G23*U54U55G56A57G58cWWntsStSHtHScWwcWW
2 IL_3NVI_0023NVI0.00001Kink-turnFRNA (24-mer)G15C16G17G19A20U21G22*C4U5G6A7C8cWWtsStSHtHScWwcWW
3 IL_3NMU_0043NMU0.09541Kink-turnERNA (34-MER)G24C25G26G28A29U30G31*C13U14G15A16C17cWWtSHtHScWwcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GCGUGAUG*CUGAC2
CAAUGAUG*UUGAG1
Non-Watson-Crick part of the motif
SequenceCounts
CGUGAU*UGA2
AAUGAU*UGA1

Release history

Release3.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Kink-turn (3)
  • Basepair signature
    cWW-tSS-L-tSH-tHS-cWW-cWW
    Heat map statistics
    Min 0.10 | Avg 0.13 | Max 0.24
    Help

    Coloring options:

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