Motif IL_68444.1 Version IL_68444.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_3R2D_001 | 3R2D | 0.2360 | 2 | R+S | RNA (12-mer) | G | 2 | C | 5 | * | G | 10 | C | 11 | cWW | cWW | |
2 | IL_6XJQ_007 | 6XJQ | 0.0000 | 2 | A | Self-alkylating ribozyme (58-MER) | C | 23 | G | 26 | * | C | 35 | G | 36 | cWW | cWW | |
3 | IL_5J7L_268 | 5J7L | 0.3782 | 2 | Stack outside cWW | DA | LSU rRNA | G | 930 | A | 933 | * | U | 847||A | C | 848 | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GCUC*GC | 1 |
CUUG*CG | 1 |
GUUA*UC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UU* | 2 |
CU* | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Stack outside cWW (1)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.24 | Avg 0.22 | Max 0.38
Coloring options: