Motif IL_69009.1 Version IL_69009.1 of this group appears in releases 0.6 to 0.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-5 | 3-4 | 6-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2QBG_015 | 2QBG | 0.0000 | 0 | B | U | 293 | A | 294 | G | 295 | * | C | 343 | A | 344 | A | 345 | A | 346 | A | 347 | cWW | ntHS | cWW | |
| 2 | IL_3UXR_013 | 3UXR | 0.4228 | 0 | A | U | 293 | A | 294 | G | 295 | * | C | 343 | G | 344 | A | 345 | A | 346 | A | 347 | cWW | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAG*CAAAA | 1 |
| UAG*CGAAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*AAA | 1 |
| A*GAA | 1 |
Release history
| Release | 0.6 |
|---|---|
| Date | 2012-04-02 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_69009.1 | Only in the parent motif |
|---|---|---|---|
| IL_60867.1 Compare | IL_2QBG_015 | IL_3UXR_013 |
Children motifs
| Child motif | Common motif instances | Only in IL_69009.1 | Only in the child motif |
|---|---|---|---|
| IL_00998.1 Compare | IL_2QBG_015 | IL_3UXR_013 | IL_3V2F_013 |
- Annotations
-
- (2)
- Basepair signature
- 08_cWW-tHS-cWW
- Heat map statistics
- Min 0.42 | Avg 0.21 | Max 0.42
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