#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3break 4 5 6 7 81-82-53-46-7
1 IL_2QBG_0152QBG0.00000B23S rRNAU293A294G295*C343A344A345A346A347cWWntHScWW
2 IL_3V2F_0133V2F0.40280A23S Ribosomal RNAU293A294G295*C343G344A345A346A347cWWcWWcSH

3D structures

Complete motif including flanking bases
SequenceCounts
UAG*CAAAA1
UAG*CGAAA1
Non-Watson-Crick part of the motif
SequenceCounts
A*AAA1
A*GAA1

Release history

Release0.70.80.90.100.110.121.01.11.21.31.41.51.61.71.81.91.101.111.121.13
Date2013-02-172013-02-172013-02-172013-02-172013-02-172013-02-172013-03-042013-04-082013-05-042013-06-012013-07-012013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-29
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_00998.1Only in the parent motif
IL_69009.1
Compare
IL_2QBG_015IL_3V2F_013IL_3UXR_013

Children motifs

Child motifCommon motif instancesOnly in IL_00998.1Only in the child motif
IL_60613.1
Compare
IL_2QBG_015IL_3V2F_013IL_4NVV_013
Annotations
  • (2)
  • Basepair signature
    cWW-R-R-tHS-cWW
    Heat map statistics
    Min 0.40 | Avg 0.20 | Max 0.40
    Help

    Coloring options:

    IL_2QBG_015:IL_2QBG_015 = 0IL_2QBG_015:IL_3V2F_013 = 0.4028IL_3V2F_013:IL_2QBG_015 = 0.4028IL_3V2F_013:IL_3V2F_013 = 0IL_2QBG_015IL_3V2F_013Discrepancy0.000.100.200.300.40
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