#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 7 8 9 101-102-74-5
1 IL_4GXY_0044GXY0.00001AAdenosylcobalamin riboswitchG76U77G78C80*G148G149A150G151U152C153cWWtWHcWW
2 IL_6VMY_0026VMY0.18521ACobalamin riboswitchG279U280A281U283*A297G298A299G300C301C302cWWtWHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUGAC*GGAGUC1
GUAAU*AGAGCC1
Non-Watson-Crick part of the motif
SequenceCounts
UGA*GAGU1
UAA*GAGC1

Release history

Release3.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-R-R-tWH-L-R-cWW
    Heat map statistics
    Min 0.19 | Avg 0.09 | Max 0.19
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