Motif IL_72211.1 Version IL_72211.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V9F_045 | 4V9F | 0.6061 | 0 | Bulged stacked bases | 0 | LSU rRNA | A | 1286 | A | 1287 | U | 1288 | C | 1289 | * | G | 1269 | U | 1270 | cWW | cWW |
| 2 | IL_1MJI_003 | 1MJI | 0.0000 | 0 | Multiple bulged bases | D | 5S rRNA fragment | G | 51 | A | 52 | A | 53 | G | 54 | * | C | 30 | C | 31 | cWW | cWW |
| 3 | IL_8OI5_011 | 8OI5 | 0.4326 | 0 | 1 | LSU rRNA | G | 238 | A | 239 | C | 240 | C | 241 | * | G | 176 | C | 177 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAUC*GU | 1 |
| GAAG*CC | 1 |
| GACC*GC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AU* | 1 |
| AA* | 1 |
| AC* | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Multiple bulged bases (1)
- Bulged stacked bases (1)
- (1)
- Basepair signature
- cWW-L-cWW-L
- Heat map statistics
- Min 0.43 | Avg 0.37 | Max 0.62
Coloring options: