Motif IL_73448.1 Version IL_73448.1 of this group appears in releases 3.77 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 1-13 | 4-8 | 5-8 | 9-12 | 10-11 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4FRG_001 | 4FRG | 0.9464 | 0 | B | cobalamin riboswitch aptamer domain | A | 6 | A | 7 | A | 8 | A | 9 | G | 10 | C | 11 | A | 12 | U | 13 | A | 14 | G | 15 | * | C | 76 | C | 77 | U | 78 | cWW | ntWW | ntHS | cWW | |
| 2 | IL_7SZU_001 | 7SZU | 0.0000 | 0 | R | RNA aptamer | C | 9 | C | 10 | A | 11 | A | 12 | U | 13 | C | 14 | G | 15 | U | 16 | A | 17 | G | 18 | * | C | 58 | U | 59 | G | 60 | cWW | tWH | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAAAGCAUAG*CCU | 1 |
| CCAAUCGUAG*CUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAAGCAUA*C | 1 |
| CAAUCGUA*U | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Heat map statistics
- Min 0.95 | Avg 0.47 | Max 0.95
Coloring options: