Motif IL_74794.1 Version IL_74794.1 of this group appears in releases 3.87 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 1-7 | 5-6 | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_8VTW_060 | 8VTW | 0.0000 | 2 | 1A | LSU rRNA | C | 1506 | A | 1507 | A | 1509|||A | A | 1509|||B | G | 1510 | * | U | 1481 | G | 1482 | cWW | cWW |
2 | IL_1NTA_004 | 1NTA | 0.7547 | 1 | B+A | RNA (18-mer) | A | 105 | C | 106 | C | 107 | A | 108 | G | 110 | * | C | 18 | U | 19 | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CAACAAG*UG | 1 |
ACCACG*CU | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AACAA* | 1 |
CCAC* | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-cWW-L-L
- Heat map statistics
- Min 0.75 | Avg 0.38 | Max 0.75
Coloring options: