Motif IL_74852.2 Version IL_74852.2 of this group appears in releases 4.7 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1NUV_003 | 1NUV | 0.4422 | 1 | E+F | RNA (13-mer) + RNA (11-mer) | C | 22 | C | 23 | G | 24 | A | 25 | C | 27 | * | G | 43 | G | 44 | A | 45 | G | 46 | cWW | ncWW | cWW | |
| 2 | IL_1NUV_001 | 1NUV | 0.0000 | 1 | A+B | RNA (13-mer) + RNA (11-mer) | C | 22 | C | 23 | G | 24 | A | 25 | C | 27 | * | G | 43 | G | 44 | A | 45 | G | 46 | cWW | ncWW | cWW | |
| 3 | IL_9H3G_049 | 9H3G | 0.8519 | 1 | A | LSU rRNA | G | 1024 | C | 1025 | A | 1026 | U | 1027 | G | 1029 | * | C | 1044 | G | 1045 | A | 1046 | C | 1047 | cWW | cHH | cWW | |
| 4 | IL_9E9Q_002 | 9E9Q | 0.8834 | 3 | A | Sarbecovirus 5'UTR | C | 46 | G | 47 | A | 48 | C | 50 | C | 53 | * | G | 15 | C | 16 | A | 17 | G | 18 | cWW | tSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCGAGC*GGAG | 2 |
| GCAUUG*CGAC | 1 |
| CGAUCAUC*GCAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGAG*GA | 2 |
| CAUU*GA | 1 |
| GAUCAU*CA | 1 |
Release history
| Release | 4.7 |
|---|---|
| Date | 2026-02-25 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.44 | Avg 0.58 | Max 0.89
Coloring options: