Motif IL_76095.1 Version IL_76095.1 of this group appears in releases 0.1 to 0.5
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 1-18 | 2-17 | 3-16 | 4-14 | 5-13 | 8-11 | 9-10 | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_2P7E_001 | 2P7E | 0.0685 | 2 | C+D | Ribozyme strand II + Ribozyme strand III | G | 19 | A | 20 | G | 21 | A | 22 | A | 23 | A | 24 | C | 25 | A | 26 | C | 27 | * | G | 35 | G | 36 | A | 38 | A | 40 | U | 41 | U | 42 | A | 43 | C | 44 | C | 45 | cWW | cWWa | tSH | tHW | tHW | cWW | cWW |
2 | IL_1M5O_002 | 1M5O | 0.0000 | 2 | B | RNA HAIRPIN RIBOZYME | G | 19 | A | 20 | G | 21 | A | 22 | A | 23 | A | 24 | C | 25 | A | 26 | C | 27 | * | G | 54 | G | 55 | A | 57 | A | 59 | U | 60 | U | 61 | A | 62 | C | 63 | C | 64 | cWW | cWWa | tSH | tHW | tHW | cWW | cWW |
3 | IL_1M5O_005 | 1M5O | 0.0529 | 2 | E | RNA HAIRPIN RIBOZYME | G | 19 | A | 20 | G | 21 | A | 22 | A | 23 | A | 24 | C | 25 | A | 26 | C | 27 | * | G | 54 | G | 55 | A | 57 | A | 59 | U | 60 | U | 61 | A | 62 | C | 63 | C | 64 | cWW | cWWa | tSH | tHW | tHW | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GAGAAACAC*GGUAUAUUACC | 2 |
GAGAAACAC*GGUACAUUACC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AGAAACA*GUAUAUUAC | 2 |
AGAAACA*GUACAUUAC | 1 |
Release history
Release | 0.1 | 0.2 | 0.3 | 0.4 | 0.5 |
---|---|---|---|---|---|
Date | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 |
Status | New id, no parents | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
Child motif | Common motif instances | Only in IL_76095.1 | Only in the child motif |
---|---|---|---|
IL_76095.2 Compare | IL_1M5O_005, IL_1M5O_002 | IL_2P7E_001 | IL_2P7D_001 |
Coloring options: