Motif IL_76776.1 Version IL_76776.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8P9A_450 | 8P9A | 0.3883 | 0 | Tandem non-canonical cWW pairs | sR | SSU rRNA | C | 1495 | U | 1496 | U | 1497 | G | 1498 | * | C | 1509 | U | 1510 | U | 1511 | G | 1512 | cWW | cwW | cWW | |
| 2 | IL_5UNE_005 | 5UNE | 0.0000 | 0 | tSH-tHW | A+B | RNA (47-MER) | G | 21 | C | 22 | A | 23 | C | 24 | * | G | 21 | C | 22 | A | 23 | C | 24 | cWW | ncSW | ntHW | cWW |
| 3 | IL_5EW4_001 | 5EW4 | 0.3111 | 0 | Tandem non-canonical cWW pairs | B+A | RNA (22-mer) | C | 14 | C | 15 | C | 16 | G | 17 | * | C | 8 | C | 9 | C | 10 | G | 11 | cWW | cWw | cBW | cWW |
| 4 | IL_7DLZ_006 | 7DLZ | 0.4054 | 1 | Y | RNA (45-MER) | C | 33 | C | 34 | C | 36 | G | 37 | * | C | 11 | G | 12 | A | 13 | G | 14 | cWW | cWW | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUG*CUUG | 1 |
| GCAC*GCAC | 1 |
| CCCG*CCCG | 1 |
| CCACG*CGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UU*UU | 1 |
| CA*CA | 1 |
| CC*CC | 1 |
| CAC*GA | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Tandem non-canonical cWW pairs (2)
- tSH-tHW (1)
- (1)
- Basepair signature
- cWW-cWW-L-R-cWW
- Heat map statistics
- Min 0.31 | Avg 0.30 | Max 0.48
Coloring options: