Motif IL_77576.1 Version IL_77576.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 5-6 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_8D29_010 | 8D29 | 0.0000 | 0 | C | RNA (34-MER) | G | 4 | A | 5 | U | 6 | A | 7 | C | 8 | * | G | 27 | C | 28 | A | 29 | G | 30 | C | 31 | cWW | cWW | ncWW | ncWW | cWW |
2 | IL_4LFB_065 | 4LFB | 0.3548 | 0 | A | SSU rRNA | G | 713 | G | 714 | A | 715 | A | 716 | C | 717 | * | G | 673 | G | 674 | A | 675 | A | 676 | U | 677 | ncWWa | cWW | ncwW | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GAUAC*GCAGC | 1 |
GGAAC*GGAAU | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AUA*CAG | 1 |
GAA*GAA | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-tHW-L-cWW-L-L-R
- Heat map statistics
- Min 0.35 | Avg 0.18 | Max 0.35
Coloring options: