Motif IL_78483.1 Version IL_78483.1 of this group appears in releases 0.1 to 0.4
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 5-8 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2ZJR_102 | 2ZJR | 0.0000 | 0 | tHS double platform (H) | X | LSU rRNA | U | 2822 | G | 2823 | C | 2824 | A | 2825 | C | 2826 | G | 2827 | * | U | 2840 | U | 2841 | C | 2842 | A | 2843 | G | 2844 | cWW | ntSH | tHH | cWW |
| 2 | IL_3F1H_107 | 3F1H | 0.6692 | 0 | A | 23S RRNA | U | 2847 | G | 2848 | U | 2849 | A | 2850 | A | 2851 | G | 2852 | * | U | 2865 | U | 2866 | G | 2867 | A | 2868 | G | 2869 | cWW | ntSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGCACG*UUCAG | 1 |
| UGUAAG*UUGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCAC*UCA | 1 |
| GUAA*UGA | 1 |
Release history
| Release | 0.1 | 0.2 | 0.3 | 0.4 |
|---|---|---|---|---|
| Date | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 |
| Status | New id, no parents | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_78483.1 | Only in the child motif |
|---|---|---|---|
| IL_82794.1 Compare | IL_2ZJR_102 | IL_3F1H_107 | IL_2QBG_109 |
- Annotations
-
- tHS double platform (H) (1)
- (1)
- Basepair signature
- Heat map statistics
- Min 0.67 | Avg 0.33 | Max 0.67
Coloring options: