Motif IL_79393.8 Version IL_79393.8 of this group appears in releases 3.62 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-7 | 2-10 | 3-8 | 3-9 | 4-5 | 7-9 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_048 | 4LFB | 0.0000 | 1 | A | SSU rRNA | G | 1124 | U | 1126 | G | 1127 | C | 1128 | * | G | 1143 | G | 1144 | C | 1145 | A | 1146 | C | 1147 | U | 1148 | C | 1149 | cWW | ncWW | ncwW | ntSH | ncSW | cWW | ncSH |
| 2 | IL_5TBW_074 | 5TBW | 0.6923 | 0 | 1 | LSU rRNA | C | 2346 | U | 2347 | A | 2348 | U | 2349 | * | A | 1883 | A | 1884 | U | 1885 | A | 1886 | A | 1887 | U | 1888 | G | 1889 | cWW | tSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUGC*GGCACUC | 1 |
| CUAU*AAUAAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUG*GCACU | 1 |
| UA*AUAAU | 1 |
Release history
| Release | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-tSH-R-R-R-cWW
- Heat map statistics
- Min 0.69 | Avg 0.35 | Max 0.69
Coloring options: