Motif IL_79669.1 Version IL_79669.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 3-6 | 4-5 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V8P_233 | 4V8P | 0.0000 | 2 | D1 | LSU rRNA | C | 1726 | U | 1727 | A | 1728 | G | 1730 | * | U | 1763 | G | 1764 | U | 1765 | A | 1766 | G | 1768 | cWW | cWW | |||
| 2 | IL_2R8S_006 | 2R8S | 0.9786 | 1 | UAA/GAN variation | R | P4-P6 RNA RIBOZYME DOMAIN | U | 253 | G | 254 | A | 256 | G | 257 | * | C | 216 | C | 217 | A | 218 | A | 219 | G | 220 | cWW | tSH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAUG*UGUAUG | 1 |
| UGCAG*CCAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAU*GUAU | 1 |
| GCA*CAA | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- UAA/GAN variation (1)
- (1)
- Basepair signature
- cWW-tSH-R-tHS-cWW
- Heat map statistics
- Min 0.98 | Avg 0.49 | Max 0.98
Coloring options: