Motif IL_80920.1 Version IL_80920.1 of this group appears in releases 3.3 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_413D_001 | 413D | 0 | 0 | Tandem non-canonical cWW pairs | A | RNA (13-mer) | U | 6 | U | 7 | C | 8 | G | 9 | * | U | 6||||2_555 | U | 7||||2_555 | C | 8||||2_555 | G | 9||||2_555 | cWW | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUCG*UUCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UC*UC | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-10-19 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Tandem non-canonical cWW pairs (1)
- Basepair signature
- cWW-cWW-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: