Motif IL_81280.1 Version IL_81280.1 of this group appears in releases 1.17 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | break | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 1-26 | 2-25 | 9-14 | 10-13 | 11-12 | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1VX6_060 | 1VX6 | 0 | 2 | A | 28S ribosomal RNA | G | 1322 | A | 1323 | C | 1325 | C | 1326 | C | 1327 | A | 1328 | U | 1329 | A | 1330 | A | 1331 | A | 1332 | A | 1333 | * | U | 1427 | G | 1428 | A | 1429 | A | 1431 | A | 1432 | U | 1433 | G | 1434 | G | 1435 | A | 1436 | U | 1437 | G | 1438 | G | 1439 | C | 1440 | G | 1441 | C | 1442 | cWW | cWW | tHH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUCCCAUAAAA*UGAAAAUGGAUGGCGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUCCCAUAAA*GAAAAUGGAUGGCG | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: