Motif IL_82292.3 Version IL_82292.3 of this group appears in releases 4.7 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 3-10 | 4-9 | 5-8 | 6-7 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4EYA_005 | 4EYA | 0.0000 | 0 | Tandem non-canonical cWW pairs with near WC pairs | g+h | RNA (12-mer) | C | 5 | C | 6 | U | 7 | U | 8 | G | 9 | G | 10 | * | C | 5 | C | 6 | U | 7 | U | 8 | G | 9 | G | 10 | ncSW | ncWW | ncWw | ncWW | cWW | |
| 2 | IL_8SSW_003 | 8SSW | 0.3976 | 0 | D+C | RNA (28-MER) | C | 11 | G | 12 | C | 13 | A | 14 | A | 15 | G | 16 | * | C | 11 | G | 12 | C | 13 | A | 14 | A | 15 | G | 16 | cWW | cHW | ncWW | ncWWa | cHW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUUGG*CCUUGG | 1 |
| CGCAAG*CGCAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUG*CUUG | 1 |
| GCAA*GCAA | 1 |
Release history
| Release | 4.7 |
|---|---|
| Date | 2026-02-25 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Tandem non-canonical cWW pairs with near WC pairs (1)
- (1)
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Heat map statistics
- Min 0.40 | Avg 0.20 | Max 0.40
Coloring options: