Motif IL_83690.1 Version IL_83690.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_3SUX_002 | 3SUX | 0.0000 | 0 | Major groove platform | X | THF riboswitch | U | 47 | G | 48 | U | 49 | * | G | 37 | A | 38 | ncWW | cWW |
2 | IL_6JOO_001 | 6JOO | 0.4803 | 2 | B | Guide RNA | G | 61 | U | 64 | C | 65 | * | G | 57 | C | 58 | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGU*GA | 1 |
GUUUC*GC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
G* | 1 |
UUU* | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Major groove platform (1)
- (1)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.48 | Avg 0.24 | Max 0.48
Coloring options: