Motif IL_84158.1 Version IL_84158.1 of this group appears in releases 3.48 to 3.53

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3		4	break		5		6		7		8	1-8	2-7	3-6	4-5
1	IL_205D_001	205D	0.0000	0	Tandem non-canonical cWW pairs	A+B	RNA (12-mer)	U	5	U	6	U	7	G	8	*	U	17	U	18	U	19	G	20	cWW	cwW	cWw	cWW
2	IL_413D_001	413D	0.5433	0	Tandem non-canonical cWW pairs	A	RNA (13-mer)	U	6	U	7	C	8	G	9	*	U	6\|\|\|\|2_555	U	7\|\|\|\|2_555	C	8\|\|\|\|2_555	G	9\|\|\|\|2_555	cWW	cWW	cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
UUUG*UUUG	1
UUCG*UUCG	1

Non-Watson-Crick part of the motif

Sequence	Counts
UU*UU	1
UC*UC	1

Release history

Release	3.48	3.49	3.50	3.51	3.52	3.53
Date	2021-08-18	2021-09-15	2021-10-13	2021-11-10	2021-12-08	2022-01-05
Status	New id, 2 parents	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: Tandem non-canonical cWW pairs (2)
Basepair signature: cWW-cWW-cWW-cWW
Heat map statistics: Min 0.54 | Avg 0.27 | Max 0.54

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