Motif IL_85480.1 Version IL_85480.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | break | 12 | 13 | 14 | 15 | 16 | 17 | 1-17 | 3-16 | 5-15 | 9-10 | 11-12 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5AJ0_016 | 5AJ0 | 0 | 0 | A2 | LSU rRNA | C | 175 | G | 176 | C | 177 | C | 178 | G | 179 | C | 180 | U | 181 | C | 182 | G | 183 | U | 184 | G | 185 | * | C | 248 | C | 249 | G | 250 | G | 251 | C | 252 | G | 253 | cWW | ncWB | ncBW | ncsS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGCCGCUCGUG*CCGGCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCCGCUCGU*CGGC | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-L-bif-L-R-R-R-L-L-L-L-cSS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: