IL_5AJ0_016
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGCCGCUCGUG*CCGGCG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85480.1
- Basepair signature
- cWW-L-bif-L-R-R-R-L-L-L-L-cSS-cWW
- Number of instances in this motif group
- 1
Unit IDs
5AJ0|1|A2|C|175
5AJ0|1|A2|G|176
5AJ0|1|A2|C|177
5AJ0|1|A2|C|178
5AJ0|1|A2|G|179
5AJ0|1|A2|C|180
5AJ0|1|A2|U|181
5AJ0|1|A2|C|182
5AJ0|1|A2|G|183
5AJ0|1|A2|U|184
5AJ0|1|A2|G|185
*
5AJ0|1|A2|C|248
5AJ0|1|A2|C|249
5AJ0|1|A2|G|250
5AJ0|1|A2|G|251
5AJ0|1|A2|C|252
5AJ0|1|A2|G|253
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AL
- 60S ribosomal protein L13
- Chain AY
- 60S ribosomal protein L26
- Chain Ah
- 60S ribosomal protein L35
- Chain Aj
- 60S ribosomal protein L37
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