#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 5 61-62-53-4
1 IL_4NVV_0654NVV0.25280A23S Ribosomal RNAC1710A1711A1712*U2017C2018G2019cWWtWWcWW
2 IL_1VW3_0471VW30.15200A21S ribosomal RNAG1615A1616A1617*U1895C1896C1897cWWtWWcWW
3 IL_2QBG_0632QBG0.13290B23S rRNAG1663A1664A1665*U1995C1996C1997cWWtWWcWW
4 IL_1S72_0601S720.11470Isolated tWW turn (H)0 LSU rRNAU1741A1742G1743*C2036C2037A2038cWWtWWcWW
5 IL_3U5H_0833U5H0.00000525S rRNAA1895A1896G1897*C2338C2339U2340cWWtWWcWW
6 IL_4A1B_0794A1B0.12330126S RRNAA1919A1920G1921*C2333C2334U2335cWWtWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAA*UCC2
AAG*CCU2
CAA*UCG1
UAG*CCA1
Non-Watson-Crick part of the motif
SequenceCounts
A*C6

Release history

Release1.14
Date2014-04-27
StatusUpdated, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_86357.4Only in the parent motif
IL_86357.3
Compare
IL_3U5H_083, IL_1S72_060, IL_2QBG_063, IL_4A1B_079IL_4NVV_065, IL_1VW3_047IL_3V2F_062

Children motifs

Child motifCommon motif instancesOnly in IL_86357.4Only in the child motif
IL_86357.5
Compare
IL_3U5H_083, IL_1VW3_047, IL_4NVV_065, IL_2QBG_063, IL_4A1B_079, IL_1S72_060IL_4CUV_082
Annotations
  • (5)
  • Isolated tWW turn (H) (1)
  • Basepair signature
    cWW-tWW-cWW
    Heat map statistics
    Min 0.10 | Avg 0.16 | Max 0.36
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