#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 5 61-62-53-4
1 IL_3V2F_0623V2F0.22850A23S Ribosomal RNAC1663A1664A1665*U1995C1996G1997cWWtWWcWW
2 IL_1S72_0601S720.11470Isolated tWW turn (H)0 LSU rRNAU1741A1742G1743*C2036C2037A2038cWWtWWcWW
3 IL_3U5H_0833U5H0.00000525S rRNAA1895A1896G1897*C2338C2339U2340cWWtWWcWW
4 IL_2QBG_0632QBG0.13290B23S rRNAG1663A1664A1665*U1995C1996C1997cWWtWWcWW
5 IL_4A1B_0794A1B0.12330126S RRNAA1919A1920G1921*C2333C2334U2335cWWtWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AAG*CCU2
CAA*UCG1
UAG*CCA1
GAA*UCC1
Non-Watson-Crick part of the motif
SequenceCounts
A*C5

Release history

Release1.11.21.31.41.51.61.71.81.91.101.111.121.13
Date2013-04-082013-05-042013-06-012013-07-012013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-29
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_86357.3Only in the parent motif
IL_86357.2
Compare
IL_3U5H_083, IL_1S72_060, IL_2QBG_063, IL_4A1B_079, IL_3V2F_062IL_2XZM_064, IL_2ZJR_061

Children motifs

Child motifCommon motif instancesOnly in IL_86357.3Only in the child motif
IL_86357.4
Compare
IL_3U5H_083, IL_1S72_060, IL_2QBG_063, IL_4A1B_079IL_3V2F_062IL_4NVV_065, IL_1VW3_047
Annotations
  • (4)
  • Isolated tWW turn (H) (1)
  • Basepair signature
    cWW-tWW-cWW
    Heat map statistics
    Min 0.11 | Avg 0.15 | Max 0.34
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.0859 s